MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
19428wB2_HT4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 288
bases: 2,382,433 bps
CDS: 2,042
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 2,093
Total number of protein coding genes annotated/found:
2,042
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5042|JADGLI010000093.1
SEQF5042_02025
Genome Viewer
NA
AA
1230/410
6-1235
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00860
Genome Viewer
NA
AA
810/270
959-150
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00861
Genome Viewer
NA
AA
708/236
1681-974
Multidrug efflux system ATP-binding protein
SEQF5042|JADGLI010000026.1
SEQF5042_00862
Genome Viewer
NA
AA
366/122
2051-1686
HTH-type transcriptional repressor YtrA
SEQF5042|JADGLI010000026.1
SEQF5042_00863
Genome Viewer
NA
AA
3108/1036
3440-6547
Error-prone DNA polymerase
SEQF5042|JADGLI010000026.1
SEQF5042_00864
Genome Viewer
NA
AA
1014/338
6629-7642
ATP-dependent 6-phosphofructokinase
SEQF5042|JADGLI010000026.1
SEQF5042_00865
Genome Viewer
NA
AA
1506/502
7686-9191
Pyruvate kinase
SEQF5042|JADGLI010000026.1
SEQF5042_00866
Genome Viewer
NA
AA
1155/385
9611-10765
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00867
Genome Viewer
NA
AA
546/182
10767-11312
L-threonine 3-dehydrogenase
SEQF5042|JADGLI010000026.1
SEQF5042_00868
Genome Viewer
NA
AA
426/142
11251-11676
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00869
Genome Viewer
NA
AA
1083/361
13018-11936
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
SEQF5042|JADGLI010000026.1
SEQF5042_00870
Genome Viewer
NA
AA
630/210
13384-14013
Acetylxylan esterase
SEQF5042|JADGLI010000026.1
SEQF5042_00871
Genome Viewer
NA
AA
525/175
14062-14586
Signal peptidase IB
SEQF5042|JADGLI010000026.1
SEQF5042_00872
Genome Viewer
NA
AA
1815/605
14739-16553
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
SEQF5042|JADGLI010000026.1
SEQF5042_00873
Genome Viewer
NA
AA
4314/1438
21602-17289
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00874
Genome Viewer
NA
AA
108/36
22537-22430
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00875
Genome Viewer
NA
AA
1083/361
23016-24098
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00876
Genome Viewer
NA
AA
864/288
24562-25425
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00877
Genome Viewer
NA
AA
774/258
25400-26173
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00878
Genome Viewer
NA
AA
999/333
26177-27175
Vitamin B12 import ATP-binding protein BtuD
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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